This version implements these new features:

  • Change docker repository to the namespace galantelab;
  • Change genome command option --structural-variation to --genomic-variation;
  • Add quality-profile for PacBio and Nanopore.

Get the code

Clone the repository for this version:

$ git clone --single-branch --branch "v0.22" https://github.com/galantelab/sandy.git

Install from CPAN

Install this version with cpanm:

# cpanm App::Sandy~"== 0.22"

For more details on installation, go to installation page.

Documentation

See the complete documentation for this version: manual